M. Takasu
Laboratory of Computational Biophysics,
Department of Life Sciences,
Tokyo University of Pharmacy and Life Sciences
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[1] M. Takasu, M. Suzuki,
Monte Carlo Simulation of Relative Diffusion in Stochastic Fields,
Physica 137A, (1986) 454-463.
[2] M. Takasu, S. Miyashita, M. Suzuki, Monte Carlo Simulation of Quantum Heisenberg Magnets on the Triangular Lattice, Prog. Theor. Phys. 75, (1986) 1254-1257.
[3] M. Suzuki, S. Miyashita, M. Takasu, Thermofield Quantum Monte Carlo Method and its Applications to Quantum Spin Systems, Phys. Rev. B35, (1987) 3569-3575.
[4] M. Takasu, S. Miyashita, M. Suzuki, Thermodynamic Properties of Spin-1/2 Heisenberg Magnets on the Triangular Lattice, Springer Series in Solid State Sciences 74, (1987) 114-124.
[5] S. Miyashita, M. Takasu, M. Suzuki, Magnetic Properties of Ising-like Heisenberg S=1/2 Antiferromagnets on the Triangular Lattice, Springer Series in Solid State Sciences 74, (1987) 104-113.
[6] M. Takasu, S. Miyashita, M. Suzuki, Y. Kanada: Monte Carlo Study of Low-temperature Properties of Quantum Ferromagnetic XY Model on the Triangular Lattice, J. de Phys., Colloque C8, (1988) 1389-1390.
[7] J. Takashima, M. Takasu, Y. Hiwatari, Monte Carlo Simulations of a Two-dimensional Charged Polymer Chain, Phys. Rev. A40, (1989) 2706-2711.
[8] M. Takasu, J. Takashima, Y. Hiwatari, A Two-dimensional Polymer Chain with Short-range Interactions, in Strongly Coupled Plasma Physics, ed. by S. Ichimaru, Elsevier Science Publishers (1990) 679-682.
[9] M. Takasu, K. Uehara, T. Muranaka, Y. Hiwatari, Molecular Dynamics Study of PdHx System, in the Proceedings of the International Workshop on Computational Materials Sciences, ed. by A. Yoshikawa, (1990) 203-206.
[10] J. Takashima, M. Takasu, Y. Hiwatari, Equilibrium Properties of a Charged Polymer Chain with Short-range Interactions, Two-dimensional Monte Carlo Studies, Molecular Simulations 6 (1991) 199-220.
[11] M. Takasu, D. Chandler, A Study of Electron Transfer Using a Three-level System Coupled to an Ohmic Bath, in the Proceedings of the Workshop of Harmonic Oscillators, NASA Conference Publications 3197, 365-370 (1992).
[12] M. Takasu, D. Chandler, Numerical Studies of Electron Transfer, in Computer Aided Innovation of New Materials II, ed. by M. Doyama et al. Elsevier Science Publishers (1993) 375-378.
[13] M. Takasu, Relaxation of Quantum Systems in a Fluctuating Medium, in Quantum Monte Carlo Methods in Condensed Matter Physics, edited by M. Suzuki, World Scientific (1993) 355-368.
[14] K. Uehara, T. Muranaka, H. Miyagawa, M. Takasu, Y. Hiwatari: Molecular-Dynamics Simulations for the Density Autocorrelation Function in a Supercooled Fluid Phase, Molecular Simulation 12 (1994)253-270.
[15] T. Muranaka, K. Uehara, M. Takasu, Y. Hiwatari, Molecular Dynamics Studies of Diffusion of Hydrogens in Palladium, Molecular Simulation 12 (1994) 329-341.
[16] T. Hasegawa, J. Takashima, M. Takasu, Y. Hiwatari, Molecular Dynamics Study of Charged Polymers with Short-range Interactions, Molecular Simulation 12 (1994) 365-381.
[17] Y. Hiwatari, J. Matsui, K. Uehara, T. Muranaka, H. Miyagawa, M. Takasu, T. Odagaki, Study of the alpha and beta Relaxation in a Supercooled Fluid via Molecular Dynamics Simulations, Physica A 204 (1994) 306-327.
[18] M. Takasu, Exact Calculations of Electron Transfer with Strong Electronic Coupling, Phys Rev E52 (1995) 418-427.
[19] N. Urakami, M. Takasu, Multicanonical Monte Carlo Simulation of a Polymer with Stickers, J. Phys. Soc. Jpn 65 (1996)2694-2699.
[20] N. Urakami, M. Takasu, Distribution of Gyration Radius of a Model of Ionomer Studied by Multicanonical Monte Carlo Simulation, Molecular Simulation 19 (1997) 63-73.
[21] N. Urakami, M. Takasu, Multicanonical MC Simulation of a Polymer with Stickers, --Initial Relaxation and Free Energy Calculations, Prog. Theor. Phys. Suppl. 126 (1997) 329-332.
[22] M. Hashimoto, M. Takasu, The Superfluid-Glass Transition of 2-D and 1-D He Systems, in Slow Dynamics in Complex Systems, Eighth Tohwa Symposium (1998), AIP Conference Proceedings 469, 571-572.
[23] N. Urakami, M. Imai, Y. Sano, M. Takasu, The Isotropic-Nematic Transition and the Phase Separation of the TMV particle by Polysaccharide, J. Chem. Phys. 111(1999) 2322-2328.
[24] M. Hashimoto, M. Takasu, Quantum MC simulation of a Boson System for Superfluid-Insulator Transition on Two-Dimensional Random Surfaces, J. Phys. Soc. Jpn. 68(1999) 2684-2691.
[25] N. Urakami, M. Imai, Y. Sano, M. Takasu, The effects of chondroitin sulfate on the tobacco mosaic virus configuration, Prog. Theor. Phys. Suppl. 138 (2000) 390-391.
[26] M. Hashimoto, M. Takasu, Boson Localization on the Superfluid-Insulator Transition by Quantum Loop Algorithm, Prog. Theor. Phys. Suppl. 138 (2000) 529-530.
[27] H. Noguchi and M. Takasu, Linear-shaped Motion of DNA in Concentrated Polymer Solutions under a Steady Field, J. Phys. Soc. Jpn, 69 (2000) 3792-3795.
[28] H. Noguchi, M. Takasu, Dynamics of DNA in Entangled Polymer Solution: an Anisotropic Friction Model, J. Chem. Phys. 114 (2001) 7260-7266.
[29] M. Nosaka, M. Takasu, Structure Analysis of Chemical Gel Using Monte Carlo Simulation, Transactions of Materials Research Society of Japan 26 (2001) 557-560.
[30] H. Noguchi, M. Takasu, Self-assembly of Amphiphiles into Vesicles: a Brownian Dynamics Simulation, Phys. Rev. E 64 (2001) 041913, 1-7.
[31] H. Noguchi, M. Takasu, Fusion Pathways of Vesicles, a Brownian Dynamics Simulation, J. Chem. Phys. 115(2001) 9547-9551.
[32] M. Nosaka, M. Takasu, K. Katoh, Characterization of Gels by Monte Carlo Method Using a Model of Radical Polymerization with Cross Linkers J. Chem. Phys. 115 (2001) 11333-11338.
[33] H. Noguchi, M. Takasu, Adhesion of Nanoparticles to Vesicles: a Brownian Dynamics Simulation, Biophys. J. 83 (2002) 299-308.
[34] H. Noguchi, M. Takasu, Structural Changes of Pulled Vesicles: a Brownian Dynamics Simulation, Phys. Rev. E 65 (2002) 051907-1〜7
[35] H. Noguchi, M. Ueda, Y. Baba, M. Takasu, Anisotropic Friction Model of DNA Electrophoresis in Polymer Solutions: Comparison with Direct Observations, J. Poly. Sci. B, Polymer Physics, 41 (2003) 1316-1322.
[36] M. Takasu, J. Tomita, Diffusion of Particle in Hyaluronan Solution, a Brownian Dynamics Simulation, AIP Conference Proceedings 708 (2004) 263-264.
[37] M. Takasu, K. Ono, N. Ohta, H. Furukawa, Simulation Study of the Structure and Dynamics of Jungle-gym type Gel, Bussei Kenkyu (Kyoto) 87 (2006) 84-85.
[38] N. Ohta, K. Ono, M. Takasu, and H. Furukawa, Structure Analysis of Jungle-Gym-Type Gels by Brownian Dynamics Simulation, American Institute of Physics, CP 982 (2008) 517-520.
[39] M. Takasu and T. Mimura, Brownian Dynamics Simulation of Diffusion in Slide-Ring Gel, American Institute of Physics, CP 982 (2008) 521-524.
[40] A. Purqon, A. Sugiyama, H. Nagao, M. Takasu, K. Nishikawa, Geometrical Classification of Spaghetti-like Nanoclusters, American Institute of Physics, CP 982 (2008) 331-326.
[41] Y. Hashimoto, M. Takasu, S. Kawamoto, T. Oda, H. Nagao, T. Sakai and U. Chung, Structure and Dynamics of Tetra-PEG Gel by Brownian Dynamics, Trans. Mat. Res. Soc. Jpn, 35 (2010) 547-553.
[42] S. Kawamoto, M. Takasu, T. Miyakawa, R. Morikawa, T.Oda, S. Futaki, H. Nagao, Inverted Micelle Formation of Cell-penetrating Peptide Studied by Coarse-grained Simulation: Importance of Attractive Force Between Cell-penetrating Peptides and Lipid Head Group, J. Chem. Phys 134, (2011) 095103 (1-6).
[43] T. Miyakawa, K. Fujiwara, K. Takahashi, K. Horiuchi, R. Morikawa, M. Takasu, Theoretical Evaluation of the Correlation Time of the E. coli Detected in the Stationary flow, J. Tokyo Univ. Pharm. and Life Sci. 14 (2011) 13-17.
[44] H. Yamada, Y. Komatsu, T. Miyakawa, R. Morikawa, F. Katagiri, K. Hozumi, Y. Kikkawa, M. Nomizu, and M. Takasu, Conformation Analysis of Loop Region Peptides in the Laminin Alpha Chain LG4 Modules by Molecular Dynamics Simulations, Peptide Science 2011, Jap. Peptide Soc. (2012) 201-204.
[45] S. Kawamoto, T. Miyakawa, M. Takasu, R. Morikawa, T. Oda, H. Saito, S. Futaki and H. Nagao, Cell Penetrating Peptide Induces Various Deformations of Lipid Bilayer Membrane: Inverted Micelle, Double Bilayer and Trans-membrane, Int. J. Quant. Chem 112 (2012)178-183.
[46] H. Saito, T. Mizukami, S. Kawamoto, T. Miyakawa, M. Iwayama, M. Takasu, H. Nagao, Molecular Dynamics Studies of Lipid Bilayer with Gramicidin A: Effects of Gramicidin A on Membrane Structure and Hydrophobic Match, Int. J. Quant. Chem.112 (2012)161-170.
[47] T. Mizukami, H. Saito, S. Kawamoto, T. Miyakawa, M. Iwayama, M. Takasu, H. Nagao, Solvation Effect of the Structural Change of a Globular Protein: a Molecular Dynamics Study, Int. J. Quant. Chem.112 (2012)344-350.
[48] S. Kawamoto, M. Takasu, T. Miyakawa, R. Morikawa, T. Oda, S. Futaki, H. Nagao, Binding of Tat Peptides on DOPC and DOPG Lipid Bilayer Membrane Studied by Molecular Dynamics Simulation, Mol. Sim. 38 (2012) 366-368
[49] K. Fujiwara, K. Horiuchi, S. Goryoda, Y. Hashidume, N. Horiguchi, T. Miyakawa, M. Takasu, M. Aoki, Observation of Cell-size Variation under Environmental Stress by Fluorescence Correlation Spectroscopy without Objective Image Magnification, J. Environ. Sci. Eng. A 1 (2012) 364-370.
[50] K. Kawaguchi, H. Takagi, M. Iwayama, M. Nishimura, T. Miyakawa, H. Saito, M. Takasu and H. Nagao, Molecular Dynamics Analyses of the Dissociation Process of ADP from Hsp90, Int. J. Quant. Chem.112 (2012) 3791-3795.
[51] H. Saito, M. Iwayama, H. Takagi, M. Nishimura, T. Miyakawa, K. Kawaguchi, M. Takasu, T. Mizukami, H. Nagao, Molecular Dynamics Study of Gramicidin A in Lipid Bilayer: Structure and Lateral Pressure Profile, Int. J. Quant. Chem. 112 (2012) 3834-3839.
[52] Y. Komatsu, M. Fukuda, H. Yamada, S. Kawamoto, T. Miyakawa, R. Morikawa, M. Takasu, S. Yokojima S. Akanuma, A. Yamagishi: Constructing Protein Nano-Fiber and Estimation of the Electronic State Around Metal Ions, Int. J. Quant. Chem. 112 (2012) 3750-3755.
[53] S. Kawamoto, M. Takasu, T. Miyakawa, R. Morikawa, T. Oda, H. Saito, S. Futaki, H. Nagao, W. Shinoda, Free Energy of Cell-penetrating Peptide through Lipid Bilayer Membrane: Coarse-Grained Model Simulation, Prog. Theor. Chem. Phys. 26 (2012) 503-511.
[54] Y. Komatsu, H. Yamada, S. Kawamoto, M. Fukuda, T. Miyakawa, R. Morikawa, M. Takasu, S. Akanuma, A. Yamagishi, Designing the Binding Surface of Proteins to Construct Nano-Fibers, Prog. Theor. Chem. Phys. 26 (2012) 555-567.
[55] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, T. Mizukami, K. Kawaguchi, H. Saito, H. Nagao, The Potentials of the Atoms around Mg2+ in the H-ras GTP and GDP Complexes, Prog. Theor. Chem. Phys. 26 (2012) 525-543.
[56] H. Yamada, T. Miyakawa, R. Morikawa, F. Katagiri, K. Hozumi, Y. Kikkawa, M. Nomizu, M. Takasu, Molecular Dynamics Simulations of Peptides Derived from Laminin Alpha 2 Chain Peptide Science 2012, Jap. Peptide Soc. (2013) 339-342.
[57] R. Morikawa, T. Miyakawa, M. Tamakoshi, M. Takasu, Simulation Study of Bacterial Colonies Formed by the Twitching Motility: the Effect of Slingshot-like Motions of Bacteria on the Colony Edge, AIP Conf. Proc. 1518 (2013) 590-593.
[58] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, K. Kawaguchi, H. Saito, H. Nagao, A Molecular Dynamics Study of Hras-GTP and GDP Complexes: the Properties of Water Molecules around Guanine Nucleotide, AIP Conf. Proc., 1518 (2013) 594-597.
[59] M. Fukuda, Y. Komatsu, R. Morikawa, T. Miyakawa, M. Takasu1, S. Akanuma1, A. Yamagishi, Simulation Study of Protein-protein Interfaces Based on the 4-helix Bundle Structure, AIP Conf. Proc., 1518 (2013) 606-609.
[60] M. Rusmerryani, T. Pakpahan, M. Nishimura, M. Takasu, K. Kawaguchi, H. Saito, H. Nagao, Transition State Analysis of Azurin via Go-like Model, AIP Conf. Proc., 1518 (2013) 641-644.
[61] K. Kawaguchi, H. Takagi, M. Takasu, H. Saito, H. Nagao, Molecular Dynamics Studies of Hsp90 with ADP: Protein-ligand Binding Dynamics, AIP Conf. Proc.,1518 (2013) 637-640.
[62] R. Fujimori, Y. Komatsu, M. Fukuda, T. Miyakawa, R. Morikawa, M. Takasu, Analysis of the Histone Protein Tail and DNA in Nucleosome Using Molecular Dynamics Simulation, AIP Conf. Proc.1518 (2013) 602-605.
[63] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, T. Mizukami, K. Kawaguchi, H. Saito, H. Nagao, Molecular Dynamics Simulations of the Hras-GTP Complex and the Hras-GDP Complex, Int. J. Quant. Chem., 113, (2013) 2333-2337. (One of the figures appeared on the cover of issue 21, vol. 113 of Int. J. Quant. Chem.)
[64] Y. Kawaguchi, Y. Yang, N. Kawashiri, K. Shiraishi, M. Takasu, I. Narumi, K. Satoh, H. Hashimoto, K. Nakagawa, Yoshiaki Tanigawa, Y. Momoki, M. Tanabe, T. Sugino, Y. Takahashi, Y. Shimizu, S. Yoshida, K. Kobayashi, S. Yokobori, A. Yamagishi, The Possible Interplanetary Transfer of Microbes: Assessing the Viability of Deinococcus spp. under the ISS Environmental Conditions for Performing Exposure Experiments of Microbes in the Tanpopo Mission, Orig. Life Evol. Biosph. 43 (2013) 411-428.
[65] T. Miyakawa, R. Morikawa, M. Takasu, A. Dobashi, K. Sugimori, K. Kawaguchi, H. Saito, H. Nagao, Analysis of Water Molecules in the Hras-GTP and GDP Complexes with Molecular Dynamics Simulations, Prog. Theor. Chem. Phys. 27, (2013) 351-360.
[66] M. Fukuda, Y. Komatsu, H. Yamada, R. Morikawa, T. Miyakawa, M. Takasu, S. Akanuma, A. Yamagishi, Evaluation of the protein interfaces that form an intermolecular four-helix bundle as studied by computer simulation, Mol. Sim. 40 (2014) 498-503.
[67] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, K. Kawaguchi, H. Saito, H. Nagao, Analysis of Water Molecules around GTP in Hras-GTP Complex and GDP in Hras-GDP Complex by Molecular Dynamics Simulations, Mol. Phys. 112 (2014) 526-532.
[68] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, T. Kawaguchi, H. Saito, H. Nagao, Network of Water Molecules Around Guanine Nucleotide in the Hras-GTP and -GDP Complexes by MD Simulations, JPS Conf. Proc. 1(2014) 016006.
[69] R. Morikawa, M. Tamakoshi, T. Miyakawa, M. Takasu, Numerical Simulation of the Twitching Motility of Bacterium Crawling on a Solid Surface, JPS Conf. Proc. 1 (2014) 016019.
[70] Y. Hirata, Y. Komatsu, M. Fukuda, H. Yamada, T. Miyakawa, R. Morikawa, S. Akanuma, A. Yamagishi, M. Takasu, Coarse-Grained Molecular Dynamics Simulation of IPMDH Proteins, JPS Conf. Proc.1 (2014) 016010.
[71] H. Yamada, M. Fukuda, T. Miyakawa, R. Morikawa, M. Takasu, Conformation Analysis of Peptides Derived from Laminin Alpha 1?2 Chain Using Molecular Dynamics Simulation, JPS Conf. Proc. 1(2014) 016016.
[72] M. Fukuda, H. Yamada, R. Morikawa, T. Miyakawa, M. Takasu, S. Akanuma, A. Yamagishi, Computer Simulation Analysis of the Protein Binding Interfaces that Form a 4-Helix Bundle Motif, JPS Conf. Proc. 1(2014) 016020.
[73] M. Kaburagi, M. Fukuda, H. Yamada, T. Miyakawa, R. Morikawa, M. Takasu, Takamitsu A. Kato, Mitsuru Uesaka, Molecular Dynamics Simulation of Telomere and TRF1, JPS Conf. Proc. 1(2014) 016018.
[74] M. Rusmerryani, M. Takasu, K. Kawaguchi, H. Saito, H. Nagao, Protein-Protein Interactions of Azurin Complex by Coarse-Grained Simulations with a Go-Like Model, JPS Conf. Proc.1 (2014) 012054.
[75] H. Saito, M. Iwayama, K. Kawaguchi, T. Mizukami, T. Miyakawa, M. Takasu, H. Nagao, Molecular Dynamics Study of Gramicidin A in Lipid Bilayer: Electrostatic Map and Ion Conduction, JPS Conf. Proc.1 (2014) 012053.
[76] Y. Fukasawa, J. Kumai, F. Katagiri, Y. Kikkawa, K. Hozumi, M. Nomizu, S. Mori, H. Yamada, M. Fukuda, T. Miyakawa, R. Morikawa, M. Takasu, Conformation Analysis of the A2G80 Peptide Derived from Laminin α2 Chain by Molecular Dynamics Simulation, Peptide Science (2014), 289-292.
[77] S. Mori, H. Yamada, M. Fukuda, Y. Fukasawa, T. Miyakawa, R. Morikawa, M. Takasu, T. Watanabe, Structure Analysis of GLP-1 by Molecular Dynamics Simulation, Peptide Science (2014), 285-288.
[78] T. Miyakawa, R. Morikawa, M. Takasu, K. Sugimori, K. Kawaguchi, H. Saito, H. Nagao, Solvent Site-dipole Fields around Guanine Nucleotides in the Hras-GTP Complex and in the Hras-GDP Complex, AIP Conf. Proc. 1599 (2014) 322-325.
[79] A. Ozawa, H. Yamada, S. Mori, Y. Noguchi, T. Miyakawa, R. Morikawa, M. Takasu, Molecular Dynamics Simulation of γS-WT and γS-G18V JPS Conf. Proc. 5 (2015) 011003.
[80] H. Itoga, R. Morikawa, T. Miyakawa, H. Yamada, Y. Natsume, T. Ueta, M. Takasu, Shape Deformation of Vesicles Containing Hard Spheres, JPS Conf. Proc. 5 (2015) 011002.
[81] S. Ogawa, S. Waide, M. Takasu, T. Miyakawa, R. Morikawa, T. Sakai, U. Chung, Molecular Dynamics Simulation of a Coarse Grained Model of Tetra-PEG Gel with Monomers of 5 and 9 particles, JPS Conf. Proc. 5 (2015) 011006.
[82] S. Mori, H. Yamada, Y. Noguchi, T. Miyakawa, R. Morikawa, T. Watanabe, M. Takasu, Structure Analysis of GLP-1 in DPC Micelle, Pep. Sci. (2015) 213-216.
[83] Y. Noguchi, H. Yamada, S. Mori, T. Miyakawa, R. Morikawa, S. Yokojima, Y. Hitotsuyanagi, K. Takeya, M. Takasu, Quantum Chemical Calculations of Structure of Antitumor Cyclic Hexapeptide RA-VII, Pep. Sci. (2015) 165-168.
[84] M. Takasu, H. Sugiyama, Y. Hirata, H. Yamada, T. Miyakawa, R. Morikawa, Molecular Dynamics Simulation of Coarse Grained Models of Gel and Proteins, AIP Conf. Proc. 1702, 090040 (2015).
[85] M. Kaburagi, H. Yamada, T. Miyakawa, R. Morikawa, M. Takasu, T. A. Kato. M. Uesaka, Molecular Dynamics Simulation of Telomeric Single-stranded DNA and POT1, Polymer Journal (2016) 48, 189-195. doi:10.1038/pj.2015.82
[86] H. Yamada, S. Mori, T. Miyakawa, R. Morikawa, F. Katagiri, K. Hozumi, Y. Kikkawa, M. Nomizu, M. Takasu, Structural Study of Cell Attachment Peptide Derived from Laminin by Molecular Dynamics Simulation, PLOS One, published online on Feb. 18, 2016 DOI: 10.1371/journal.pone.0149474.
[87] T. Ishioka, H. Yamada, T. Miyakawa, R. Morikawa, S. Akanuma, A. Yamagishi, M. Takasu, Mutual Positional Preference of IPMDH Proteins for Binding Studied by Coarse-grained Molecular Dynamics Simulation, AIP Conf. Proc. 1790 (2016) 020023.
[88] Y. Noguchi, H. Yamada, S. Mori, T. Miyakawa, R. Morikawa, S. Yokojima, Y. Hitotsuyanagi, K. Takeya, M. Takasu, Structure and Hydrogen Bonds of Cyclohexapeptide RA-VII by Molecular Dynamics Simulations and Quantum Chemical Calculations, Mol. Sim. 44 (2017) 73-84.
[89] A. Ozawa, H. Yamada, S. Mori, Y. Noguchi, T. Miyakawa, R. Morikawa, M. Takasu, Structure and Hydrogen Bonds of γS-crystallin and γS-G18V Studied by Molecular Dynamics Simulation, AIP Conf. Proc. 1906 (2017) 0300020 (1-4).
[90] T. Ozawa, H. Yamada, T. Miyakawa, R. Morikawa, S. Yagi, S. Akanuma, A. Yamagishi, M. Takasu, Coarse-Grained Molecular Dynamics Simulation of Sulerythrin and LARFH for Producing Protein Nanofibers, Proc. 8th Int. Conf. BioSci. Biochem. Bioinf. 8 (2018) 43-47.
[91] M. Watabe, H. Yamada, T. Miyakawa, R. Morikawa, M. Takasu, T. Uchida, A. Yamagishi, Structural Analysis of Metal-Binding Peptides Using Molecular Dynamics, Proc. 8th Int. Conf. BioSci. Biochem. Bioinf. 8 (2018) 75-79.
[92] H. Takeuchi, H. Okajima, H. Yamada, T. Miyakawa, R. Morikawa, M. Takasu, Y. K. Hayashi, Simulation Study for Wild-Type and C101F Mutant of LIM2 Domain in FHL1, Proc. 8th Int. Conf BioSci, Biochem, Bioinf. 8 (2018) 1-5.
[93] H. Itoga, R. Morikawa, T. Ueta, T. Miyakawa, Y. Natsume, and M. Takasu, Effect of Particles with Repulsive Interactions Enclosed in Both Rigid Spherical Shells and Flexible Fluid Vesicles Studied by Monte Carlo Simulation, Phys. Rev. E 99, 042418 (2019).
[94] H. Takeuchi, H. Okajima, H. Itoga, K. Nobuoka, H. Yamada, T. Miyakawa, R. Morikawa, Y. K. Hayashi, M. Takasu, Molecular Dynamics Simulation of Myopathy-related Mutant FHL1 in Water and Analysis of Structure Stabilization, AIP Conf. Proc. 2186, 030012 (2019).
[95] T. Miyakawa, R. Morikawa, M. Takasu, M., K. Sugimori, K. Kawaguchi, and Nagao H., Relationship between Dynamics of Structures and Dynamics of Hydrogen Bonds in Hras-GTP/GDP Complex, Proc. 10th Int. Conf. Biosci. Biochem. Bioinf. 1-7 (2020).
[96] K. Nobuoka, H. Yamada, T. Miyakawa, R. Morikawa, T. Watanabe, and M. Takasu, Docking Simulation of Chemerin-9 and ChemR23 Receptor, Proc. 10th Int. Conf. Biosci. Biochem, Bioinf. 22-27 (2020).
[97] M. Watabe, K. Nobuoka, H. Yamada, T. Miyakawa, M. Takasu, T. Uchida, A. Yamagishi, Analyses of Interaction between Platinum bonded LARFH and Gold Surface by Molecular Dynamics Simulation, Proc. 10th Int. Conf Biosci, Biochem, Bioinf. 101-106 (2020).
[98] H. Mitsuhashi, R. Morikawa, Y. Noguchi and M. Takasu, Dissipative Particle Dynamics Simulations for Shape Change of Growing Lipid Bilayer Vesicles, Life 13 (2023) 306.
[99] A. Kobayashi, M. Nakajima, Y. Noguchi, R. Morikawa, Y. Matsuo, M. Takasu, Molecular Dynamics Simulation of the Complex of PDE5 and Evodiamine, Life 13 (2023) 578.
[100] K. Nariyama, Y. Noguchi, N. Nakajima, H. Yamada, R. Morikawa, M. Takasu, and S. Fujiwara, Coarse-Grained Molecular Dynamics Simulation of Thermostable Starch Branching Enzyme, Proc. 13rd Int. Conf BioSci. Biochem. Bioinf. (2023) 112-119．
[101] M. Sekine, M. Nakajima, Y. Noguchi, R. Morikawa, G. Kawahara, K. Y. Hayashi and M. Takasu, Structural Analysis of the Zebrafish fhl1 Protein: Comparison of Two Modeling Approaches, accepted for publication in Proc.34th IUPAP Conf. Comp. Phys. (2024)．
[1] 鈴木増雄、宮下精二、高須昌子: 量子系のモンテカルロ法、 数理科学別冊「シミュレーション」(1993) 12-20.
[2]高須昌子: モンテカルロ法を用いたポリマーとゲルのシミュレーション、 高分子、1999年5月号、333-333.
[3] 高須昌子、野坂誠: ゲルの生成過程のモンテカルロシミュレーション、 日本化学会情報化学部会誌、20, 86-87 (2002).
[4]高須昌子：シミュレーション発達の４つの段階, 分子シミュレーション研究会ニュースレター、2003年７月号、p.6.
[5] 高須昌子：モンテカルロ法（基礎講座）、応用物理2007年1月号、67-70.
[6] 高須昌子：書評「クリスタル・ボール」「ザ・ゴール」 クリエイジ、286号、2010年2月8日。
[7] 高須昌子：物理の普遍性（コラム「物理っておもしろい？」） パリティ 2010年11月号、p.59.
[8] 高須昌子：物理学の教育改善 --金沢大学医学科１年生の授業例---、 大学の物理教育、2011年、17号１巻、25-28.
[9] 高須昌子：生命科学部における物理学の授業、 大学の物理教育、2013年、19号２巻、52-55.
[10] 高須昌子:研究室だより「東京薬科大学生命科学部 生命物理科学研究室」、 分子シミュレーション研究会会誌アンサンブル, Vol. 15, No.2, April 2013 (通巻62号) 129-132.
[11] 横谷明徳、高須昌子、石川顕一： 放射線生物学の最前線 -- DNA損傷機構と損傷修復の 分子シミュレーション、日本原子力学会誌アトモス, Vol. 56, No.2 、2014年2月発行、81-85.
[12] 高須昌子：高分子シミュレーションを始める前に ―実験研究者のための入門編―、高分子 64, 3月号(2015) 141-142.
[13] 高須昌子：編集後記、日本物理学会誌、69, No. 10 (2014) 730-731.
[14] 高須昌子： シミュレーションに対する三つの考え方、高分子64, 3月号 (2015) 159.
[15] 高須昌子：大学の物理教育編集委員会規程の制定で思うこと（巻頭言），大学の物理教育，23 (2017) 130-131.
[16] 高須昌子：支部担当理事として（巻頭言），日本物理学会誌 72 (2017) 315.
[17] 渡部真央，野口瑶，山田寛尚，宮川毅，森河良太，高須昌子：高校生の化学の理解における立体模型とコンピュータの役割--夏休み研究実習から-- 東京薬科大学教職課程年報 2 (2018) 9-12.
[18] 高須昌子，小島正樹：正十二面体上のランダム・ウォークに関する入試問題のコンピュータによる検証：３進数の利用，東京薬科大学研究紀要21 (2018) 55-60.
[19] 高須昌子：全国大会と異文化交流，物理オリンピック日本委員会会報 20 (2018) 3.
[20] 高須昌子: 物理教育委員長として、日本物理学会誌、73, 8(2018) 537.
[21] 高須昌子: 生命科学部１年ゼミにおけるソフトマター物理、 大学の物理教育、24(2018)104-107.
[22] 高須昌子, 渡部真央、信岡慶一、岩崎萌、野口瑶、宮川毅、森河良太、 教員向け講座「生命科学への誘い」における立体模型と コンピュータ・シミュレーションによる分子の理解と授業での活用の可能性、 東京薬科大学教職課程年報 3, (2019)1-5.
[23] 高須昌子: 1年ゼミにおけるキャリア教育 --先輩インタビューの導入--, 東京薬科大学研究紀要、22 (2019) 43-48.
[24] 高須昌子:『教育のためのTOC 研究と事例』創刊にあたって、教育のためのTOC 研究と事例、1 (2019) 2.
[25] 高須 昌子，アクティブ・ラーニングによる論理力養成 − 八王子いちょう塾講座の報告−，東京薬科大学研究紀要，23 (2020) 41-46.
[26] 高須 昌子，物理教科書のブランチを用いた理解，東京薬科大学研究紀要，24 (2021) 58-62.
[27] 高須 昌子, 会誌編集委員長として（巻頭言），日本物理学会誌，76 (2021) 623．
[28] 高須 昌子, 石飛 昌光, 森河 良太, 宮川 毅， 生命科学の学生を対象とした物理学の教科書とアクティブラーニング教材の作成， 東京薬科大学研究紀要，24 (2021) 71-76.
[29] 野口 瑶, 森河 良太, 西田 洋平, 野口 航, 小島 正樹, 高須 昌子， 生命科学部における情報科学およびデータサイエンス教育について， 東京薬科大学研究紀要，25 (2022) 77-84.
[30] 高須昌子，会誌編集委員長として（巻頭言），日本物理学会誌，77 (2022) 589．
[31] 高須昌子，研究室だより「東京薬科大学生命科学部 生命物理科学研究室」分子シミュレーション学会誌 アンサンブル 25 (2023) 1，101.
[32] 高須昌子，理系英語入門:「微分」を英語で理解する --八王子いちょう塾講座の報告--, 東京薬科大学研究紀要, 27, (2024) 92-97.
・井上英史監修、石飛昌光・高須昌子・宮川毅・森河良太著、「基礎講義 物理学--アクティブラーニングにも対応--」 東京化学同人、2019年 （１−３章を執筆）.
[1] J. M. ティッセン著、 松田和則・道廣嘉隆・谷村吉隆・高須昌子・吉江友照訳、 「計算物理学」、シュプリンガージャパン、2003 (10-13章および付録Bを担当)．
[2] J. ブルー，A. L. トラックスラー，X. C. シド著、高須昌子 訳、 物理に女性が少ないのはなぜか―大学教員がするべきこと―、パリティ、34, 3(2019) 22-29.
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