Publication

2005年以降に発表した論文、総説などです。

2023

Yoshizu D, Kouzuma A, Watanabe K. Use of microbial fuel cells for the treatment of residue effluents discharged from an anaerobic digester treating food wastes. Microorganisms, 11, 598.

Tomita K, Hirose A, Tanaka Y, Kouzuma A, Watanabe K. Electrogenetic control of gene expression in Shewanella oneidensis MR-1 using Arc-dependent transcriptional promoters. J. Biosci. Bioeng. 136:28-34.

Ikeda S, Tomita K, Nakagawa G, Kouzuma A, Watanabe K. Supplementation with amino 1 acid sources facilitates fermentative growth of Shewanella oneidensis MR-1 in defined media. Appl. Environ. Microbiol. 89:e0086823

Harada T, Hasegawa Y, Jomori S, Inohana M, Uno Y, Kouzuma A, Watanabe K. Improved electrochemical properties of graphite electrodes incubated with iron powders in rice-paddy fields boost power outputs from microbial fuel cells. Biosci. Biotechnol. Biochem. 87:1229-1235.

Ochiai I, Harada T, Jomori S, Kouzuma A, Watanabe K. Bioaugmentation of microbial electrolysis cells with Geobacter sulfurreducens YM18 for enhanced hydrogen production from starch. Bioresour. Technol. 386:129508.

猪鼻将睦、原田智香、渡辺一哉. 生体電極触媒を用いた有用物質生産．触媒. 65:270-275.


2022

Yamada S, Takamatsu Y, Ikeda S, Kouzuma A, Watanabe K. Towards application of electro-fermentation for the production of value-added chemicals from biomass feedstocks. Front. Chem. 9:805597

Yamada S, Kouzuma A, Watanabe K. Development of a CRISPR interference system for selective gene knockdown in Acidithiobacillus ferrooxidans. J. Biosci. Bioeng. 133:105-109


2021

Nagoya M, Kouzuma A, Watanabe K. Codh/Acs-deficient methanogens are prevalent in anaerobic digesters. Microorganisms, 9:2248.

Ikeda S, Takamatsu Y, Tsuchiya M, Suga K, Tanaka Y, Kouzuma A, Watanabe K. Shewanella oneidensis MR-1 as a bacteria platform for electro-biotechnology. Essays Biochem. 65:355-364.

Matsumoto A, Koga R, Kanaly R, Kouzuma A, Watanabe K. Identification of a diguanylate cyclase that facilitates biofilm formation on electrodes by Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 87:e00201-21.

Hirose A, Kouzuma A, Watanabe K. Hydrogen-dependent current generation and energy conservation by Shewanella oneidensis MR-1 in bioelectrochemical systems. J. Biosci. Bioeng. 131:23-33.

土屋美愉、川南朱里、落合一太、渡邉一哉. 発電菌利用の研究開発動向と今後の展望. バイオエネルギー再燃（シーエムシー出版）

土屋美愉、渡辺一哉. 植物を利用した微生物発電. 微生物による発電・水素生産（シーエムシー出版）

落合一太、川南朱里、渡邉一哉. 微生物電気分解槽による水素生産. 微生物による発電・水素生産（シーエムシー出版）

高妻篤史. Shewanella属細菌の発電機構と応用. 微生物による発電・水素生産（シーエムシー出版）


2020

Koga R, Matsumoto A, Kouzuma A, Watanabe K. Identification of an ECF sigma factor that facilitates c-type cytochrome maturation and current generation under electrolyte-flow conditions in Shewanella oneidensis MR-1. Environ. Microbiol. 22:3671-3684.

Matsumoto A, Nagoya M, Tsuchiya M, Suga K, Inohana Y, Yamada S, Hirose A, Kouzuma A, Watanabe K. Enhanced electricity generation in rice paddy-field microbial fuel cells supplemented with iron powders. Bioelectrochemistry 136:107625.

Inohana Y, Katsuya S, Koga R, Kouzuma A, Watanabe K. Shewanella algae relatives capable of generating electricity from acetate contribute to coastal sediment microbial fuel cells treating complex organic matter. Microbes Environ. 35:19161.

Suzuki Y, Kouzuma A, Watanabe K. CRISPR/Cas9-mediated genome editing of Shewanella oneidensis MR-1 using a broad host-range pBBR1-based plasmid. J. Gen. Appl. Microbiol. 66:41-45.

Nagoya M, Kouzuma A, Ueno Y, Watanabe K. Isolation of an obligate mixotrophic methanogen that represents the major population in thermophilic fixed-bed anaerobic digesters. Microorganisms 8:217.

山田祥平、渡辺一哉. 微生物燃料電池の基礎と応用. 燃料電池 （燃料電池開発情報センター） 20:17-22

渡邉一哉. 微生物発電. 日経BP テクノロジー・ロードマップ 2020.

Inohana Y, Matsumoto A, Nagoya M, Hirose A, Kouzuma A, Watanabe K. Rice paddy-field microbial fuel cells: fundamental and recent progress. Bioelectrochemical systems: Vol. 2 Current and emerging applications. Springer/nature. 287-298.

渡邉一哉. 電気化学活性をもつ微生物の基礎と水処理への応用. バイオリファイナリーと分離技術（液体清澄化技術工業会）.

松元陽歩、名古屋美紗、富岡優樹、渡邉一哉. 14章 微生物電池. 酵素トランスデューサーと酵素技術展開（シーエムシー出版） 173-179.


2019

Inaba R, Nagoya M, Kouzuma A, Watanabe K. Metatranscriptomic evidences for magnetite nanoparticle-accelerated acetoclastic methanogenesis under continuous agitation. Appl. Environ. Microbiol. 85:e01733-19.

Kasai T, Suzuki Y, Kouzuma A, Watanabe K. Roles of D-lactate dehydrogenases in the anaerobic growth of Shewanella oneidensis MR-1 on sugars. Appl. Environ. Microbiol. 85:e02668.

Hirose A, Kasai T, Koga K, Suzuki Y, Kouzuma A, Watanabe K.Understanding and engineering electrochemically active bacteria for sustainable biotechnology. Bioresourc. Bioprocess. 6:10.

Hirose A, Kouzuma A, Watanabe K. Towards development of electrogenetics using electrochemically active bacteria. Biotechnol. Adv. 37:107351.

Kasai T, Tomioka Y, Kouzuma A, Watanabe K. Overexpression of the adenylate cyclase gene cyaC facilitates current generation by Shewanella oneidensis in bioelectrochemical system. Bioelectrochemistry 129:100-105.

Fujinawa K, Nagoya M, Kouzuma A, Watanabe K. Conductive carbon nano-particles inhibit methanogens and stabilize hydrogen production in microbial electrolysis cells. Appl. Microbiol. Biotechnol. 103:6385-6392.

名古屋美紗、渡邉一哉．発電微生物を利用した水素生産. Ceramics Japan 54:429.

渡邉一哉. 微生物発電. 日経BP テクノロジー・ロードマップ 2019.


2018

Miyauchi T, Kouzuma A, Abe T, Watanabe K. Complete Genome Sequence of Acidithiobacillus ferridurans JCM 18981. Microbiol. Resour. Announ. 7 e01028-18.

Ueoka N, Kouzuma A, Watanabe K. Electrode plate-culture methods for colony isolation of exoelectrogens from anode microbiomes. Bioelectrochem. 124:1-6.

Hirose A, Kasai T, Aoki M, Umemura T, Watanabe K, Kouzuma A. Electrochemically active bacteria sense electrode potentials for regulating catabolic pathways. Nature Commun. 9:1083.

Amano N, Yamamuro A, Miyahara M, Kouzuma K, Abe T, Watanabe K. Methylomusa anaerophila gen. nov., sp. nov., an anaerobic methanol-utilizing bacterium isolated from a microbial fuel cell. Int. J. Syst. Evol. Microbiol. 68:1118-1122.

Kouzuma A, Ishii S, Watanabe K. Metagenomic insights into the ecology and physiology of microbes in bioelectrochemical system. Bioresour. Technol. 255:302-307.

Kasai T, Kouzuma A, Watanabe K. CpdA is involved in amino acid metabolism in Shewanella oneidensis MR-1. Biosci. Biotechnol. Biochem. 82:166-172.

Watanabe K. Foreward. Microbial fuel cell technology for bioelectricity (Sivasankar et al. eds) Springer/nature London.

茂木久恵、高妻篤史、渡邉一哉．微生物燃料電池を用いた廃水処理．環境浄化技術．17:6-11.

笠井拓哉、廣瀬篤弥、高妻篤史、渡邉一哉．Shewanellaにおける嫌気呼吸鎖の発現制御機構．環境バイオテクノロジー学会誌．18:43-50.

渡邉一哉、垣内彩実．特別演習報告：糠床中の乳酸菌の活性化に関する研究．東京薬科大学紀要．21:67-72.

高妻篤史．電気で微生物を制御する．バイオミディア．生物工学 96:346.

渡邉一哉. 微生物発電. 日経BP テクノロジー・ロードマップ 2018.

上岡永佳、渡邉一哉. 発電菌の基礎と応用. 酵素工学 10:19-22.

猪鼻淑乃、渡邉一哉. 発電する微生物. 麻酔 67:S1-S9.


2017

Asai Y, Miyahara M, Kouzuma A, Watanabe K. Comparative evaluation of wastewater-treatment microbial fuel cells in terms of organics removal, waste-sludge production and electricity generation. Bioresour. Bioprocess. 4:30.

Kitayama M, Koga R, Kasai T, Kouzuma A, Watanabe K. Structures, compositions and activities of live Shewanella biofilms formed on graphite electrodes in electrochemical flow cells. Appl. Environ. Microbiol.83:00903-17 .

Kasai T, Kouzuma A, Watanabe K. CRP regulates D-lactate oxidation in Shewanella oneidensis MR-1. Front. Microbiol. 8:869.

Kouzuma A, Tsutsumi M, Ishii S, Ueno Y, Abe T, Watanabe K. Non-autotrophic methanogens dominate in thermophilic anaerobic digesters. Sci. Rep. 7:1510.

Ishii K, Miyahara M, Watanabe K. Anode macrostructures influence electricity generation in microbial fuel cells for wastewater treatment J. Biosci. Bioeng. 123:91-94.

渡邉一哉．水田の発電菌で電池をつくる．現代農業　4:328-332

茂木久恵、渡邉一哉．微生物電気化学システムの排水処理処理技術への応用. 水環境学会誌．40:325-328.

渡邉一哉．発電型廃水処理．ケミカルエンジニヤリング　62:18-23.


2016

Takahashi S, Miyahara M Kouzuma A, Watanabe K. Electricity generation from rice bran in microbial fuel cells. Bioresour. Bioprocess. 3:50.

Miyahara M, Sakamoto A, Kouzuma A, Watanabe K. Poly iron sulfate flocculant as an effective additive for improving the performance of microbial fuel cells. Bioresour. Technol. 221:331-335.

Ueoka N, Kouzuma A, Watanabe K. Missing iron-oxidizing acidophiles highly sensitive to organic compounds. Microbes Environ. 31:244-248.

Hamamoto K, Miyahara M, Kouzuma A, Yoda M, Ishiguro T, Hashimoto K, Watanabe K. Evaluation of microbial fuel cells for electricity generation from oil-contaminated wastewater. J. Biosci. Bioeng. 122:589-593.

Miyahara M, Kouzuma A, Watanabe K. Sodium chloride concentration determines exoelectrogens in anode biofilms occurring from mangrove-grown brackish sediment. Bioresour. Technol. 218:674-679.

Fujinawa K, Asai Y, Miyahara M, Kouzuma A, Abe T, Watanabe K. Genomic features of uncultured methylotrophs in activated-sludge microbiomes grown under different enrichment procedures. Sci. Rep. 6:26650.

Ueoka N, Sese N, Sue M, Kouzuma A, Watanabe K. Sizes of anode and cathode affect electricity generation in rice paddy-field microbial fuel cells. J. Sus. Bioenergy Syst. 6:10-15.

宮原盛雄、高妻篤史、渡邉一哉. 微生物燃料電池の開発と展望. 表面・界面技術ハンドブック NTS出版 482-490.

上岡永佳、渡邉一哉. 微生物燃料電池技術を用いた水田発電. Electrochemistry 84:104-106.

廣瀬篤弥、高妻篤史、渡邉一哉. 微生物燃料電池による廃水処理の現状と課題. 用水と廃水 58:33-38.

廣瀬篤弥、高妻篤史、渡邉一哉. 第12章　微生物燃料電池. バイオマスエネルギーの技術と市場 CMC出版.


2015

Nakagawa G, Kouzuma A, Hirose A, Kasai H, Yoshida G, Watanabe K. Metabolic characteristics of a glucose- utilizing Shewanella oneidensis strain grown under electrode-respiring conditions. Plos One 10:e0138813.

Kouzuma A, Kasai T, Hirose A, Watanabe K. Catabolic and regulatory systems in Shewanella oneidensis MR-1 involved in electricity generation in microbial fuel cells. Front. Microbiol. 6:609.

Miyahara M, Kouzuma A, Watanabe K. Effects of NaCl concentration on anode microbes in microbial fuel cells. AMB Express 5:34.

Kouzuma A, Kato S, Watanabe K. Microbial interspecies interactions: recent findings in syntrophic consortia. Front. Microbiol. 6:477.

Kasai T, Kouzuma A, Nojiri H, Watanabe K. Transcriptional mechanisms for differential expression of outer membrane cytochrome genes omcA and mtrC in Shewanella oneidensis MR-1. BMC Microbiol. 15:68.

Miyahara M, Yoshizawa T, Kouzuma A, Watanabe K. Floating boards improve electricity generation from wastewater in cassette-electrode microbial fuel cells. J. Wat. Env. Technol. 13:221-230.

Kouzuma A, Watanabe K. Exploring the potential of algae/bacteria interaction. Cur. Opin. Biotechnol. 33:125-129.

Lee T, Okamoto A, Jung A, Nakamura R, Kim J, Watanabe K, Hashimoto K. Microbial electrochemical technologies producing electricity and valuable chemicals from biodegradation of waste organic matters. In C. Nakatsu (ed), Manual of Environmental Microbiology 4, ASM press, Washington.

宮原盛雄、浅井佑介、中川大輔、渡邉一哉. 微生物燃料電池による廃水処理システム. クリーンエネルギー. 24:26-33.

宮原盛雄、渡邉一哉. 第9章微生物燃料電池. エネルギーハーベスティングの設計と応用展開. CMC出版 110-119.

滝沢宏次、廣瀬篤弥、渡邉一哉. 微生物燃料電池・微生物太陽電池の研究開発. 会報光触媒47:74-79.

渡邉一哉. 環境バイオテクノロジーの発展と普及. バイオサイエンスとインダストリー 73:449-454.

宮原盛雄、坂本晃洋、渡邉一哉. 微生物燃料電池システムによる廃水処理. 科学と工業 大阪工研協会 82:402-409.


2014

Kouzuma A, Kaku N, Watanabe K. Microbial electricity generation in rice paddy fields: recent advances and perspectives in rhizosphere microbial fuel cells. Appl. Microbiol. Biotechnol. 98:9521-9526.

Yoshizawa T, Miyahara M, Kouzuma A, Watanabe K. Conversion of activated-sludge reactors to microbial fuel cells for wastewater treatment coupled to electricity generation. J. Biosci. Bioeng. 118:533-539.

Kouzuma A, Oba H, Tajima N, Hashimoto K, Watanabe K. Electrochemical selection and characterization of a high current-generating Shewanella oneidensis mutant with altered cell-surface morphology and biofilm-related gene expression. BMC Microbiol. 14:190.

Kato S, Sasaki S, Watanabe K, Yumoto I, Kamagata Y. Physiological and transcriptomic analyses of a thermophilic, aceticlastic methanogen Methanosaeta thermophila responding to ammonia stress. Microbes Environ. 29:162-167.

Yamamuro A, Kouzuma A, Abe T, Watanabe K. Metagenomic analyses reveal the involvement of syntrophic consortia in methanol/electricity conversion in microbial fuel cells. PLoS ONE 9:e98425.

Kouzuma A, Watanabe K. Microbial ecology pushes frontiers in biotechnology. Microbes Environ. 29:1-3.

宮原盛雄、渡邉一哉. 微生物燃料電池による廃水処理. 化学工学 78:886-889.

宮原盛雄、渡邉一哉. 石井良和. 微生物燃料電池による廃水処理システムの開発と実用化への課題. クリーンテクノロジー.　 24:47-51.


2013

Zhao Y, Watanabe K, Hashimoto K. Efficient oxygen reduction by a Fe/Co/C/N nano-porous catalyst in neutral media. J. Mat. Chem. A. 1:1450-1456.

Miyahara M, Hashimoto K, Watanabe K. Use of cassette-electrode microbial fuel cells for wastewater treatment. J. Biosci. Bioeng. 115:176-181.

Nishio K, Hashimoto K, Watanabe K. Light/electricity conversion by defined cocultures of Clamydomonas and Geobacter. J. Biosci. Bioeng. 115:412-417.

Kato S, Hashimoto K, Watanabe K. Iron-oxide minerals affect extracellular electron-transfer paths of Geobacter spp. Microbes Environ. 28:141-148.

Nishio K, Hashimoto K, Watanabe K. Digesting algal biomass for electricity generation in microbial fuel cells. Biosci. Biotechnol. Biochem. 77:670-672.

Inoue K, Ito T, Kawano Y, Iguchi A, Miyahara M, Suzuki Y, Watanabe K. Electricity generation from cattle manure slurry by cassette-electrode microbial fuel cells. J. Biosci. Bioeng. 116:610-615.

Matsuda S, Liu H, Kouzuma A, Watanabe K, Hashimoto K, Nakanishi S. Electrochemical gating of tricaboxylic acid cycle in electricity-producing bacterial cells of Shewanella. PLoS One 8:e72901.

Kouzuma A, Kasai T, Nakagawa G, Yamamuro A, Abe T, Watanabe K. Comparative metagenomics of anode- associated microbiomes developed in rice paddy-field microbial fuel cells. PLoS One 8:e77443.

Watanabe K, Kouzuma A．3.1. Syntrophic interactions in biodegradative consortia. In: Nojiri, H., M. Tsuda, M. Fukuda, and Y. Kamagata (eds), Biodegradative Bacteria. Springer Verlag, Tokyo. p267-277.

渡邉一哉、加藤創一郎．微生物の電気共生　−微生物と鉱物がつくる土の中のミクロな送電網ー．現代科学．1月号44-48.

高妻篤史．電流生成菌の遺伝子改変による発電効率の向上．BIOINDUSTRY 30:11-17.

石井良和、渡邉一哉．微生物燃料電池用電極や装置に関する研究開発の現状．BIOINDUSTRY 30:18‐23.

宮原盛雄．微生物燃料電池の廃水処理への応用．BIOINDUSTRY 30:31‐36.

高妻篤史，渡邉一哉．微生物燃料電池. 太陽エネルギー 39:5-10.

渡邉一哉．微生物燃料電池への期待．産業と環境 2013.6:73-74.

渡邉一哉. 微生物燃料電池開発の現状と今後の展望．微生物燃料電池による廃水処理システム最前線. 3-6. NTS

��妻篤史. 微生物の細胞外電子伝達の分子メカニズム. 微生物燃料電池による廃水処理システム最前線. 47-65. NTS

宮原盛雄, 神谷信行. 微生物燃料電池用カソードの開発. 微生物燃料電池による廃水処理システム最前線. 143-162. NTS

宮原盛雄. 水処理用微生物燃料電池の開発. 微生物燃料電池による廃水処理システム最前. 163-171. NTS


2012

Zhao, Y., K. Watanabe and K. Hashimoto. Self-supporting oxygen reduction electrocatalysts made from a nitrogen-rich network polymer. J. Am. Chem. Soc. 134:19828-19831.

Kouzuma, A., K. Hashimoto and K. Watanabe. Roles of siderophore in manganese-oxide reduction by Shewanella oneidensis MR-1. FEMS Microbiol. Lett. 326:91-98.

Kouzuma, A., K. Hashimoto, and K. Watanabe. Influences of aerobic respiration on current generation by Shewanella oneidensis MR-1 in single-chamber microbial fuel cells. Biosci. Biotechnol. Biochem. 76:270-275.

Kato, S., K. Hashimoto and K. Watanabe. Methanogenesis facilitated by electric syntrophy via (semi)conductive iron-oxide minerals. Environ. Microbiol. 14:1646-1654.

Zhao, Y., K. Watanabe and K. Hashimoto. Poly(bis-2,6-diaminopyridinesulphoxide) as an efficient and stable electrocatalyst for oxygen reduction reaction. J. Materials Chem. 22:12263-12267.

Ohno, S., H. Okano, Y. Tanji, A. Ohashi, K. Watanabe, K. Takai and H. Imachi. A method for evaluating the host range of bacteriophages using phages fluorescently labeled with 5-ethynyl-2'-deoxyuridine (EdU). Appl. Microbiol. Biotechnol. 95:777-788.

Kato, S., K. Hashimoto and K. Watanabe. Microbial interspecies electron transfer mediated by electric currents through conductive minerals. Proc. Nat. Acad. Sci. USA. 109:10042-10046.

Kodama, Y., T. Shimoyama and K. Watanabe. Dysgonomonas oryzarvi sp. nov., isolated from a microbial fuel cell. Int. J. Syst. Evol. Microbiol. 62:3055-3059.

Abe, K., A. Ueki, Y. Ohtaki, N. Kaku, K. Watanabe, and K. Ueki. Anaerocella delicata gen. nov., sp. nov., a strictly anaerobic bacterium in the phylum Bacteroidetes isolated from a methanogenic reactor of cattle farms. J. Gen. Appl. Microbiol. 58:405-412.

高妻篤史、宮原盛雄、渡邉一哉．微生物燃料電池の可能性ーグリーンイノベーションへの挑戦ー．化学と生物　50:150-152.

渡邉一哉．循環型産業体系を支える微生物プロセスの構築を目指して．化学経済　8:56‐61．


2011

Ueki A, K. Abe, Y. Ohtaki, N. Kaku, K. Watanabe, and K. Ueki. Bacteroides paurosaccharolyticus sp. nov., isolated from a methanogenic reactor treating waste from cattle farms. Int. J. Syst. Evol. Microbiol. 61:488-453.

Suzuki,C., C.-S. Yun, T. Umeda, T. Terabayashi, K. Watanabe, H. Yamane, and H. Nojiri. Oligomerization and DNA-binding capacity of Pmr, a histone-like protein H1 (H-NS) family protein encoded on IncP-7 carbazole-degradative plasmid pCAR1. Biosci. Biotechnol. Biochem. 75:711-717.

Kodama, Y., and K. Watanabe. Rhizomicrobium electricum sp. nov., a facultatively anaerobic, fermentative, prosthecate bacterium isolated from a cellulose-fed microbial fuel cell. Int. J. Syst. Evol. Microbiol. 61:1781-1785.

Zhao, Y., S. Nakanishi, K. Watanabe and K. Hashimoto. Hydroxylated and aminated polyaniline nanowire networks for improving anode performance in microbial fuel cells. J. Biosci. Bioeng. 112:63-66.

Zhao Y., K. Watanabe, and K. Hashimoto. Hierarchical micro/nano structures of carbon composite as anodes for microbial fuel cells. Phys. Chem. Chem. Phys., 13:15016-15021.

Watanabe, K., M. Miyahara, T. Shimoyama, and K. Hashimoto. Population dynamics and current-generation mechanisms in cassette-electrode microbial fuel cells. Appl. Microbiol. Biotechnol. 92:1307-1314.

Tajima, N., A. Kouzuma, K. Hashimoto, and K. Watanabe. Selection of Shewanella oneidensis MR-1 gene-knockout mutants that adapt to an electrode-respiring condition. Biosci. Biotechnol. Biochem. 75:2229-2233.

Sugawara, Y., A. Ueki, K. Abe, N. Kaku, K. Watanabe, and K. Ueki. Propioniciclava tarda gen. nov., sp. nov., isolated from a methanogenic reactor treating waste from cattle farms. Int. J. Syst. Evol. Microbiol. 61:2298-2303.

Nishio, K., A. Kouzuma, S. Kato, and K. Watanabe. Chapter 10 Energy from slime? Power from microbial fuel cells. Biofilm book, current research and applications. G. Lear, G. D. Lewis, eds., Caister Academic Press. p175-192.

渡邉一哉、橋本和仁. レアメタル回収・バイオ燃料電池への応用が期待される電流生産菌とは？ Material stage 10:8-10

渡邉一哉. 生物発電／微生物電池． 実用水の処理・活用大事典（産業調査会）p508-513．

渡邉一哉. バクテリアがつくる1 μmの電池. パリティ 8:40-43.

上野嘉之, 渡邉一哉. 廃棄物系バイオマスを原料とする微生物燃料電池の研究開発. クリーンエネルギー（日本工業出版）9:59-64.

渡邉一哉. 第８章　１　電池の構造およびカソード反応. バイオ電池の最新動向（加納健司編）CMC press. p212-218.

渡邉一哉. 第８章　４　水田発電. バイオ電池の最新動向（加納健司編）CMC press. p235-240.


2010

Nishio, K., K. Hashimoto, and K. Watanabe. Light/electricity conversion by a self-organized photosynthetic biofilm in a single-chamber reactor Appl. Microbiol. Biotechnol. 86:957-964.

Zhao, Y., K. Watanabe, R. Nakamura, S. Mori, H. Liu, K. Ishii, and K. Hashimoto. Three-dimensional conductive nanowire networks for maximizing anode performance in microbial fuel cells. Chemistry 16:4982-4985.

Takanezawa, K., K. Nishio, S. Kato, K. Hashimoto, and K. Watanabe. Factors affecting electric output from rice-paddy microbial fuel cells. Biosci. Biotechnol. Biochem. 74:1271-1273.

Kouzuma, A., X.-Y. Meng, N. Kimura, K. Hashimoto, and K. Watanabe. Disruption of the putative cell-surface polysaccharide biosynthesis gene SO3177 in Shewanella oneidensis MR-1 enhances the adhesiveness to electrodes and current generation in microbial fuel cells. Appl. Environ. Microbiol. 76:4151-4157.

Ueki, A., Y. Kodama, N. Kaku, T. Shiromura, A. Satoh, K. Watanabe, and K. Ueki. Rhizomicrobium palustre gen. nov., sp. nov., a facultatively anaerobic, fermentative stalked bacterium in the class Alphaproteobacteria isolated from rice plant roots. J. Gen. Appl. Microbiol. 56:193-203.

Kato, S., R. Nakamura, K. F., Kai, K. Watanabe, and K. Hashimoto. Respiratory interactions of soil bacteria with (semi)conductive iron-oxide minerals. Environ. Microbiol. 12:3114-3123.

Kato, S., and K. Watanabe. Ecological and evolutionary interactions in syntrophic methanogenic consortia. Microbes Environ, 25:145-151.

Watanabe, K. Biofuel Cells, Performance Characterization. Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology. Wiley, 1-8.

Shimoyama, T., and K. Watanabe. Chapter 15 Emerging techniques for metagenome screening. In METAGENOMICS and its applications in agriculture, biomedicine, and environmental studies. Li, R. W. ed., Nova Science Publishers.

Kouzuma, A., and K. Watanabe. Molecular approaches for the analysis of natural attenuation and bioremediation.Comprehensive Biotechnology, 2nd Ed. Butler, Webb, Moreira, Grodzinski, Cui & Agathos., ed., Elsevier.

Watanabe, K., and K. Nishio. Electric power from rice paddy field. Paths to sustainable energy, Edited by: Jatin Nathwani, Artie Ng. In-tech, p563-580.

上野嘉之、渡邉一哉. 微生物燃料電池の実用化への課題と展望. 水環境学会誌 33:366-370.

上野嘉之、渡邉一哉. 微生物燃料電池を用いた廃水からのエネルギー回収．月刊浄化槽　406:26-29.

渡邉一哉. バイオ燃料電池の研究開発動向．触媒年鑑　触媒学会編　p.67-77.

笠井由紀、渡邉一哉. 石油汚染海洋環境浄化. 水環境の浄化・改善技術（菅原正孝監修）シーエムシー出版　p39-52.


2009

Harwati, T. U., Y. Kasai, Y. Kodama, D. Susilaningsih, and K. Watanabe. Tropicibacter naphthalenivorans gen. nov., sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from the Semarang port in Indonesia. Int. J. Syst. Evol. Microbiol. 59: 388-391.

Harwati, T. U., Y. Kasai, Y. Kodama, D. Susilaningsih, and K. Watanabe. Tropicimonas isoalkanivorans gen. nov., sp. nov., a branched alkane-degrading bacterium isolated from the Semarang port in Indonesia. Int. J. Syst. Evol. Microbiol. 59:392-396.

Shimoyama, T., S. Kato, S. Ishii, and K. Watanabe. Flagellum mediates symbiosis. Science 323:1574.

Shimoyama, T., Yamazawa, Y. Ueno, and K. Watanabe. Phylogenetic analyses of microbial communities developed in a cassette-electrode microbial fuel cell. Microbes Environ. 24:188-192.

Kato, S., T. Kosaka, and K. Watanabe. Substrate-dependent transcriptomic shifts in Pelotomaculum thermopropionicum grown in syntrophic coculture with Methanothermobacter thermautotrophicus. Microb. Biotechnol. 2:575-584.

Ueki, A., K. Abe, D. Suzuki, N. Kaku1, K. Watanabe, and K. Ueki. Anaerosphaera aminiphila gen. nov., sp. nov., a novel, glutamate-degrading, Gram-positive anaerobic coccus isolated from a methanogenic reactor of cattle waste. Int. J. Syst. Evol. Microbiol. 59:3161-3167.

Habe, H., A. Kobuna, A. Hosoda, T. Kosaka, T. Endoh, H. Tamura, H. Yamane, H. Nojiri, T. Omori, and K. Watanabe. Identification of the electron transfer flavoprotein as upregulated enzyme in the benzoate utilization of Desulfotignum balticum. Biosci. Biotechnol. Biochem. 73:1647-1652.

Kato, S., and K. Watanabe. Analysis of gene transcripts in a crude oil-degrading marine microbial community. Biosci. Biotechnol. Biochem. 73:1665-1668.

Nishiyama, T., A. Ueki, N. Kaku, K. Watanabe, and K. Ueki. Bacteroides graminisolvens sp. nov., novel, xylanolytic anaerobic rods isolated from a methanogenic reactor of cattle waste. Int. J. Syst. Evol. Microbiol. 59:1901-1907.

Newton, G. J., S. Mori, R. Nakamura, K. Hashimoto, and K. Watanabe. Analyses of current-generating mechanisms of Shewanella loihica PV-4 and Shewanella oneidensis MR-1 in microbial fuel cells. Appl. Environ. Microbiol. 75:7674-7681.

Watanabe, K., Manefield, M., Lee, M., and Kouzuma, A. Electron shuttles in biotechnology. Curr. Opin. Biotechnol. 20:633-641.

Watanabe, K. and Bennett, G. Chemical biotechnology: an expanding discipline that contributes to sustainable development in the 21st century. Curr. Opin. Biotechnol. 20:607-609.

Watanabe, K., and Y. Takahata. Bioremediation of benzene-contaminated underground aquifers. In Advances in Applied Bioremediation. Ajay Singh, Ramesh C. Kuhad and Owen P. Ward (Editors) Series: Soil Biology, Springer 189-199.

Watanabe, K. Environmental mining of biological activities on hydrocarbons. In Handbook of hydrocarbon and lipid microbiology: microbial interactions with hydrocarbons oils, fats and related hydrophobic substrates and products. Ken Timmis ed., Springer Verlag 1213-1217.

加藤創一郎、渡邉一哉. 遺伝子発現に基づいたメタゲノムの解析・利用技術. マリンメタゲノムの有効利用、シーエムシープレス．3-13.

加藤創一郎、渡邉一哉. メタン発酵共生系の進化と生存戦略. 化学と生物、47:253-260.

高坂智之、渡邉一哉. ゲノム情報を基に微生物共生のメカニズムを探る. 日本バイオインフォマティックス学会ニュースレター 19: September 4-5.

山澤哲、上野嘉之、下山武文、渡邉一哉. 廃棄物系バイオマスを原料とする微生物燃料電池の研究開発 -実用化に向けた基礎的検討. 鹿島技術研究所年報 57:135-138.

下山武文、渡邉一哉. メタン発酵 -ゲノム解析から明らかになった共生細菌の進化と生存戦略-. 難培養微生物研究の最新技術II　-ゲノム解析を中心とした最前線と将来展望-　大熊盛也、工藤俊章　監修、シーエムシープレス．159-169.

高妻篤史、橋本和仁、渡邉一哉. 微生物燃料電池での電流生産を可能にするShewanella oneidensisの細胞外電子伝達機構. J. Environ. Biotechnol. 9:105-108.


2008

Ishii, S., T. Shimoyama, Y. Hotta and K. Watanabe. Characterization of a filamentous biofilm community established in a cellulose-fed microbial fuel cell. BMC Microbiol. 8:6.

Ueki, A., K. Abe, N. Kaku, K. Watanabe, and K. Ueki. Bacteroides propionicifaciens sp. nov., isolated from rice-straw residue in a methanogenic reactor treating waste from cattle farms. Int. J. Syst. Evol. Microbiol. 58:346-352.

Kodama, Y., A. Ueki, K. Ueki and K. Watanabe. Thalassospira tepidiphila sp. nov., a polycyclic aromatic hydrocarbons degrading bacteria isolated from seawater. Int. J. Syst. Evol. Microbiol. 58:711-715.

Kato, S., T. Kosaka, and K. Watanabe. Comparative transcriptome analysis of responses of Methanothermobacter thermautotrophicus to different environmental stimuli. Environ. Microbiol. 10:893-905.

Kosaka, T., S. Kato, T. Shimoyama, S. Ishii, T. Abe, and K. Watanabe. The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota. Genome Res. 18:442-448.

Ishii, S., Y. Hotta and K. Watanabe. Methanogenesis versus electrogenesis: morphological and phylogenetic comparisons of microbial communities. Biosci. Biotechnol. Biochem. 72:286-294.

Harwati, T. U., Y. Kasai, Y. Kodama, D. Susilaningsih, and K. Watanabe. Tranquillimonas alkanivorans gen. nov., sp. nov., an alkane-degrading bacterium isolated from the Semarang port in Indonesia. Int. J. Syst. Evol. Microbiol. 58:2118-2121.

Kaku, N., N. Yonezawa, Y. Kodama, and K. Watanabe. Plant/microbe cooperation for electricity generation in a rice paddy field. Appl. Microbiol. Biotechnol. 79:43-49

Habe, H., A. Kobuna, A. Hosoda, A. Kouzuma, H. Yamane, H. Nojiri, T. Omori, and K. Watanabe. Subtractive hybridization and random arbitrarily primed PCR analyses of a benzoate-assimilating bacterium, Desulfotignum balticum. Appl. Microbiol. Biotechnol. 79:87-95.

Uchiyama, T., and K. Watanabe. Substrate-induced gene-expression (SIGEX) screening of metagenome libraries. Nature protocol 3:1202-1212.

Shimoyama, T., S. Komukai, A. Yamazawa, Y. Ueno, B. E. Logan and K. Watanabe. Electricity generation from model organic wastewater in a cassette-electrode microbial fuel cell. Appl. Microbiol. Biotechnol. 79:325-330.

Kodama, Y., and K. Watanabe. An electricity-generating prosthecate bacterium strain Mfc52 isolated from a microbial fuel cell FEMS Microbiol. Lett., 288:55-62.

Sode, K., W. Tsugawa, M., Aoyagi, E. Rajashekhara, and K. Watanabe. Propionate sensor using coenzyme-A transferase and acyl-CoA oxidase. Protein Peptide Lett., 15:779-781.

Ishii, S., K. Watanabe, S. Yabuki, B. E. Logan, and Y. Sekiguchi. Comparison of electrode reducing activities of Geobacter sulfurreducens and an enriched consortium in an air-cathode microbial fuel cell. Appl. Environ. Microbiol. 74:7348-7355.

Watanabe, K. Recent developments of microbial fuel cell technologies for sustainable bioenergy. J. Biosci. Bioeng. 106:528-536.

渡邉一哉、下山武文、山澤哲、上野嘉之. カセット電極微生物燃料電池システム. 燃料電池、8:110-113.


2007

Park, M.-O., H. Ikenaga, and K. Watanabe. Characterization of phages produced in a methanogenic digester. Microb. Ecol. 53:98-103.

Manefield, M., A. Whiteley, T. Curtis, and K. Watanabe. The influence of sustainability and immigration in assembling bacterial populations of known size and function. Microb. Ecol. 53:348-354.

Kodama, Y., L. T. Ha, and K. Watanabe. Sulfurospirillum cavolei, sp. nov., a facultatively anaerobic sulfur-reducing bacterium isolated from an underground crude-oil storage cavity. Int. J. Syst. Evol. Microbiol. 57:827-831.

Shimoyama, T., E. Rajashekhara, D. Ohmori, T. Kosaka, and K. Watanabe. MmcBC in Pelotomaculum thermopropionicum represents a novel group of prokaryotic fumarases. FEMS Microbiol. Lett. 270:207-213.

Kasai, Y., Y. Kodama, Y. Takahata, T. Hoaki and K. Watanabe. Degradative capacities and bioaugmentation potential of an anaerobic benzene- degrading bacterium strain DN11. Environ. Sci. Technol. 41:6222-6227.

Harwati, T. U., Y. Kasai, Y. Kodama, D. Susilaningsih, and K. Watanabe. Characterization of diverse hydrocarbon-degrading bacteria isolated from Indonesian seawater. Microbes Environ. 22:412-415.

Uchiyama, T., and K. Watanabe. The SIGEX Scheme: high throughput screening of environmental metagenomes for the isolation of novel catabolic genes. Biotechnol. Gen. Eng. Rev. 24:107-116.

Watanabe, K., and Y. Kasai. Emerging technologies to analyse natural attenuation and bioaugmentation. In Microbial bioremediation: genomics and molecular biology, Caister Academic Press, p295-316.

渡辺一哉、石井俊一. 微生物燃料電池の最近の進歩. バイオ電気化学の実際、シーエムシープレス．303-314.

下山武文，加藤創一郎，渡辺一哉. メタゲノムアプローチの新規手法. 環境バイオテクノロジー学会誌 7:79-86.

高畑陽、笠井 由紀、渡辺 一哉、帆秋利洋. 嫌気ベンゼン分解菌DN11株を用いる土壌・地下水の浄化技術. 大成建設技術センター報,　第40号 43-1−43-6.


2006

Kosaka, T., T. Uchiyama, S. Ishii, M. Enoki, H. Imachi, Y. Kamagata, A. Ohashi, H. Harada, H. Ikenaga, and K. Watanabe. Reconstruction and regulation of the central catabolic pathway in thermophilic propionate-oxidizing syntroph Pelotomaculum thermopropionicum. J. Bacteriol. 188:202-210.

Rajashekhara, E., A. Hosoda, K. Sode, H. Ikenaga and K. Watanabe. Volatile fatty acid-sensing system involving coenzyme A transferase. Biotechnol. Prog. 22:334-337.

Kasai, Y., Y. Takahata, M. Manefield, and K. Watanabe. RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater. Appl. Environ. Microbiol. 72:3586-3592.

Miyasaka, T., H. Asami, and K. Watanabe. Impacts of different bioremediation strategies on bacterial population in naphthalene-contaminated marine sediments. Biodegradation 17:227-235.

Ishii, S. T. Kosaka, Y. Hotta, and K. Watanabe. Simulating the contribution of coaggregation to interspecies hydrogen fluxes in syntrophic methanogenic consortia. Appl. Environ. Microbiol. 72:5093-5096.

Uchiyama, T., and K. Watanabe. An improved inverse PCR scheme for metagenome walking. Biotechniques, 41:183-188.

Gorby, Y. A., S. Yanina, J. S. McLean, K. M. Rosso, D. Moyles, A. Dohnalkova, T. J. Beveridge, I. S. Chang, B. H. Kim, K. S. Kim, D. E. Culley, S. B. Reed, M. F. Romine, D. A. Saffarini, E. A. Hill, L. Shi, D. A. Elias, D. W. Kennedy, G. Pinchuk, K. Watanabe, S. Ishii, B. Logan, K. H. Nealson, and J. Fredrickson. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proc. Nat. Acad. Sci. USA 103:11358-11363.

Takahata, Y., Y. Kasai, T. Hoaki, and K. Watanabe. Rapid intrinsic biodegradation of benzene, toluene and xylenes at the boundary of a gasoline- contaminated plume during natural attenuation. Appl. Microbiol. Biotechnol. 73:713-722.

Kanaly, R. A., K. Watanabe, and S. Matsui. Bioavailability of benzo[a]pyrene during NAPL-enhanced biodegradation in soil and in liquid culture. Water Sci. Technol. 53:17-25.

石井俊一、堀克敏、堀田康明、渡辺一哉. メタン発酵共生微生物群が形成する凝集体の観察. 医学顕微鏡学会誌 20:6-8.

渡辺一哉. 有用微生物の馴養・導入による生物処理の高度化. 用水と廃水 48:102-107.

渡辺一哉. 高効率フェノール分解活性汚泥の創出. p. 124-131, 複合微生物系の産業利用と新産業創出. シーエムシープレス.

下山武文、渡辺一哉. 環境メタゲノムのスクリーニング法. BIO INDUSTRY 23:15-20.


2005

Meguro, N., Y. Kodama, M. T. Gallegos, and K. Watanabe. Molecular characterization of Resistance-Nodulation- Division transporters from solvent- and drug-resistant bacteria in petroleum-contaminated soil. Appl. Environ. Microbiol. 71:580-586.

Uchiyama, T., T. Abe, T. Ikemura and K. Watanabe. Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes. Nature Biotechnol. 23:88-93.

Futamata, H., Y. Nagano, K. Watanabe, and A. Hiraishi. Unique kinetic properties of phenol-degrading Variovorax strains responsible for efficient trichloroethylene degradation in chemostat enrichment. Appl. Environ. Microbiol. 71:904-911.

Hosoda, A., Y. Kasai, N. Hamamura, Y. Takahata, and K. Watanabe. Development of a PCR method for the detection and quantification of benzoyl-CoA reductase genes and its application to monitored natural attenuation. Biodegradation 16:591-601.

Kaku, N., A. Ueki, K. Ueki, and K. Watanabe. Methanogenesis as an important terminal electron accepting process in estuarine sediment at the mouth of Orikasa river. Microbes Environ. 20:41-52.

Kasai, Y., Y. Takahata, T. Hoaki, and K. Watanabe. Physiological and molecular characterization of a microbial community established in unsaturated, petroleum-contaminated soil. Environ. Microbiol. 7:806-818.

Asami, H., M. Aida, and K. Watanabe. Accelerated sulfur cycle in coastal marine sediment beneath areas of intensive shellfish aquaculture. Appl. Environ. Microbiol. 71:2925-2933.

Ishii, S., T. Kosaka, K. Hori, Y. Hotta, and K. Watanabe. Coaggregation facilitates interspecies hydrogen transfer between Pelotomaculum thermopropionicum and Methanothermobacter thermautotrophicus. Appl. Environ. Microbiol. 71:7838-7845.

Ramos, J. L., M. Martinez-Bueno, A. J. Molina-Henares, W. Teran, K. Watanabe, X. Zhang, M. T. Gallegos, R. Brennan and R. Tobes. The TetR family of transcriptional repressors. Microbiol. Mol. Biol. Rev., 69:326-356.

内山拓、渡辺一哉. SIGEX法を利用したメタゲノムからの代謝系酵素遺伝子のスクリーニング. 化学と生物 43:115-120.

Watanabe, K., and T. Uchiyama. Reply to “Probllems with metagenomic screening”Nat Biotechnol. 23:1045-1046.

渡辺一哉. メタゲノムと微生物生態解析. 極限微生物学会誌　4:74-76.

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